Neko-TOP
A portable framework for high-order spectral element flow toplogy optimization.
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optimizer.f90
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41 use json_module, only: json_file
42 use simulation_m, only: simulation_t
43 use problem, only: problem_t
44 use design, only: design_t
45 use num_types, only: rp
46 use logger, only: neko_log
47 use profiler, only: profiler_start_region, profiler_end_region
48 use mpi_f08, only: mpi_wtime, mpi_allreduce, mpi_max
49 use utils, only: neko_error, filename_suffix
50 use csv_file, only: csv_file_t
51 use vector, only: vector_t
52 use json_utils, only: json_get_or_default
53 use comm, only: pe_rank, mpi_real_precision, neko_comm
54 use continuation_scheduler, only: nekotop_continuation
55
56 implicit none
57 private
58
60 type, abstract, public :: optimizer_t
61
63 character(len=64), private :: optimizer_type = ''
65 integer, private :: max_iterations = 0
67 integer, private :: current_iteration = 0
68
69 ! ----------------------------------------------------------------------- !
70 ! Restart related members
71
73 character(len=256), private :: checkpoint_file = ''
74
75 ! Checkpoint related information
76 character(len=256), private :: checkpoint_path = './checkpoints/'
77 character(len=256), private :: checkpoint_base = 'optimizer_checkpoint'
78 character(len=256), private :: checkpoint_format = 'hdf5'
79 integer, private :: checkpoint_interval = -1
80
81 ! Variables for the runtime-based stopping criteria
82 real(kind=rp), private :: max_runtime = -1.0_rp
83 real(kind=rp), private :: start_time = 0.0_rp
84 real(kind=rp), private :: average_time = 0.0_rp
85 real(kind=rp), private :: step_count = 0.0_rp
86 ! Logging state
87 logical, private :: log_initialized = .false.
88 logical, private :: log_include_constraints = .true.
89 integer, private :: log_extra_size = 0
90 type(csv_file_t), private :: log_file
91 type(vector_t), private :: log_data
92
93 contains
94
95 ! ---------------------------------------------------------------------- !
96 ! Deferred procedures for specific optimizers
97
99 procedure(optimizer_init_from_json), pass(this), public, deferred :: &
100 init_from_json
102 procedure(optimizer_free), pass(this), public, deferred :: free
103
105 procedure(optimizer_initialize), pass(this), public, deferred :: initialize
107 procedure(optimizer_step), pass(this), public, deferred :: step
109 procedure(optimizer_validate), pass(this), public, deferred :: validate
110
112 procedure(optimizer_write), pass(this), public, deferred :: write
114 procedure(optimizer_save_checkpoint_components), pass(this), deferred :: &
115 save_checkpoint_components
117 procedure(optimizer_load_checkpoint_components), pass(this), deferred :: &
118 load_checkpoint_components
119
121 procedure, pass(this) :: save_checkpoint => optimizer_save_checkpoint
123 procedure, pass(this) :: load_checkpoint => optimizer_load_checkpoint
124
125 ! ----------------------------------------------------------------------- !
126 ! Public procedures
127
129 procedure, pass(this), public :: run => optimizer_run
130
131 ! ----------------------------------------------------------------------- !
132 ! Private procedures
133
135 procedure, pass(this) :: init_base => optimizer_init_base
137 procedure, pass(this) :: free_base => optimizer_free_base
139 procedure, pass(this) :: read_base_settings => optimizer_read_base_settings
141 procedure, pass(this) :: print_status => optimizer_print_status
143 procedure, pass(this) :: out_of_time => optimizer_out_of_time
145 procedure, pass(this) :: init_log => optimizer_init_log
147 procedure, pass(this) :: write_log => optimizer_write_log
148 end type optimizer_t
149
150 ! -------------------------------------------------------------------------- !
151 ! Interface for the optimizer module.
152
153 abstract interface
154
155 subroutine optimizer_init_from_json(this, parameters, problem, design, &
156 simulation)
157 import optimizer_t, json_file, simulation_t, problem_t, design_t, rp
158 class(optimizer_t), intent(inout) :: this
159 type(json_file), intent(inout) :: parameters
160 class(problem_t), intent(inout) :: problem
161 class(design_t), intent(in) :: design
162 type(simulation_t), optional, intent(in) :: simulation
163 end subroutine optimizer_init_from_json
164
168 subroutine optimizer_initialize(this, problem, design, simulation)
170 class(optimizer_t), intent(inout) :: this
171 class(problem_t), intent(inout) :: problem
172 class(design_t), intent(inout) :: design
173 type(simulation_t), optional, intent(inout) :: simulation
174 end subroutine optimizer_initialize
175
177 subroutine optimizer_free(this)
178 import optimizer_t
179 class(optimizer_t), intent(inout) :: this
180 end subroutine optimizer_free
181
183 logical function optimizer_step(this, iter, problem, design, simulation)
185 class(optimizer_t), intent(inout) :: this
186 integer, intent(in) :: iter
187 class(problem_t), intent(inout) :: problem
188 class(design_t), intent(inout) :: design
189 type(simulation_t), optional, intent(inout) :: simulation
190 end function optimizer_step
191
193 subroutine optimizer_validate(this, problem, design)
195 class(optimizer_t), intent(inout) :: this
196 class(problem_t), intent(in) :: problem
197 class(design_t), intent(in) :: design
198 end subroutine optimizer_validate
199
201 subroutine optimizer_write(this, iter, problem)
203 class(optimizer_t), intent(inout) :: this
204 integer, intent(in) :: iter
205 class(problem_t), intent(inout) :: problem
206 end subroutine optimizer_write
207
209 subroutine optimizer_save_checkpoint_components(this, filename, overwrite)
210 import optimizer_t
211 class(optimizer_t), intent(inout) :: this
212 character(len=*), intent(in) :: filename
213 logical, intent(in), optional :: overwrite
214 end subroutine optimizer_save_checkpoint_components
215
217 subroutine optimizer_load_checkpoint_components(this, filename)
218 import optimizer_t
219 class(optimizer_t), intent(inout) :: this
220 character(len=*), intent(in) :: filename
221 end subroutine optimizer_load_checkpoint_components
222
223 end interface
224
225 ! -------------------------------------------------------------------------- !
226 ! Interfaces for the factory functions
227
235 module subroutine optimizer_factory(object, parameters, problem, design, &
236 simulation)
237 class(optimizer_t), allocatable, intent(inout) :: object
238 type(json_file), intent(inout) :: parameters
239 class(problem_t), intent(inout) :: problem
240 class(design_t), intent(in) :: design
241 type(simulation_t), optional, intent(in) :: simulation
242 end subroutine optimizer_factory
243 end interface optimizer_factory
244
245 ! -------------------------------------------------------------------------- !
246 ! IO routines for HDF5 checkpoints
247
248 interface
249
250 module subroutine optimizer_save_checkpoint_hdf5(object, filename, iter, &
251 overwrite)
252 class(optimizer_t), intent(inout) :: object
253 character(len=*), intent(in) :: filename
254 integer, intent(in) :: iter
255 logical, intent(in), optional :: overwrite
256 end subroutine optimizer_save_checkpoint_hdf5
257
259 module subroutine optimizer_load_checkpoint_hdf5(object, filename, iter)
260 class(optimizer_t), intent(inout) :: object
261 character(len=*), intent(in) :: filename
262 integer, intent(out) :: iter
263 end subroutine optimizer_load_checkpoint_hdf5
264 end interface
265
266 public :: optimizer_factory
267
268contains
269
270 ! -------------------------------------------------------------------------- !
271 ! Base initializer and free routines
272
284 subroutine optimizer_init_base(this, optimizer_type, max_iterations, &
285 max_runtime, checkpoint_file, checkpoint_path, checkpoint_base, &
286 checkpoint_format, checkpoint_interval)
287 class(optimizer_t), intent(inout) :: this
288 character(len=*), intent(in) :: optimizer_type
289 integer, intent(in) :: max_iterations
290 real(kind=rp), intent(in), optional :: max_runtime
291 character(len=*), intent(in), optional :: checkpoint_file
292 character(len=*), intent(in), optional :: checkpoint_path
293 character(len=*), intent(in), optional :: checkpoint_base
294 character(len=*), intent(in), optional :: checkpoint_format
295 integer, intent(in), optional :: checkpoint_interval
296
297 ! Mandatory settings
298 this%optimizer_type = optimizer_type
299 this%max_iterations = max_iterations
300
301 ! Optional settings
302 if (present(max_runtime)) this%max_runtime = max_runtime
303 if (present(checkpoint_file)) this%checkpoint_file = checkpoint_file
304 if (present(checkpoint_path)) this%checkpoint_path = checkpoint_path
305 if (present(checkpoint_base)) this%checkpoint_base = checkpoint_base
306 if (present(checkpoint_format)) this%checkpoint_format = checkpoint_format
307 if (present(checkpoint_interval)) then
308 this%checkpoint_interval = checkpoint_interval
309 end if
310
311 ! Initialize internals
312 this%start_time = mpi_wtime()
313
314 end subroutine optimizer_init_base
315
318 subroutine optimizer_free_base(this)
319 class(optimizer_t), intent(inout) :: this
320
321 this%optimizer_type = ''
322 this%max_iterations = 0
323 this%max_runtime = -1.0_rp
324 this%checkpoint_file = ''
325 this%checkpoint_path = './checkpoints/'
326 this%checkpoint_base = 'optimizer_checkpoint'
327 this%checkpoint_format = 'hdf5'
328 this%checkpoint_interval = -1
329
330 this%start_time = 0.0_rp
331 this%current_iteration = 0
332 call this%log_data%free()
333 this%log_initialized = .false.
334 this%log_extra_size = 0
335 this%log_include_constraints = .true.
336
337 end subroutine optimizer_free_base
338
342 subroutine optimizer_read_base_settings(this, solver_params)
343 class(optimizer_t), intent(inout) :: this
344 type(json_file), intent(inout) :: solver_params
345 integer :: read_int
346 real(kind=rp) :: read_real
347 character(len=:), allocatable :: read_str
348
349 call json_get_or_default(solver_params, 'max_runtime', read_real, &
350 this%max_runtime)
351 this%max_runtime = read_real
352 call json_get_or_default(solver_params, 'restart_file', read_str, &
353 this%checkpoint_file)
354 this%checkpoint_file = read_str
355
356 call json_get_or_default(solver_params, 'checkpoint.path', read_str, &
357 this%checkpoint_path)
358 this%checkpoint_path = read_str
359 call json_get_or_default(solver_params, 'checkpoint.base', read_str, &
360 this%checkpoint_base)
361 this%checkpoint_base = read_str
362 call json_get_or_default(solver_params, 'checkpoint.format', read_str, &
363 this%checkpoint_format)
364 this%checkpoint_format = read_str
365 call json_get_or_default(solver_params, 'checkpoint.interval', read_int, &
366 this%checkpoint_interval)
367 this%checkpoint_interval = read_int
368
369 end subroutine optimizer_read_base_settings
370
371
372 ! -------------------------------------------------------------------------- !
373 ! Optimization loop routine
374
387 subroutine optimizer_run(this, problem, design, simulation)
388 class(optimizer_t), intent(inout) :: this
389 class(problem_t), intent(inout) :: problem
390 class(design_t), intent(inout) :: design
391 type(simulation_t), optional, intent(inout) :: simulation
392 real(kind=rp) :: iteration_time
393 character(len=1024) :: checkpoint_file
394 logical :: converged, file_exists
395 integer :: stop_flag
396
397 ! Initialize variables
398 stop_flag = 1
399 converged = .false.
400
401 ! Restart from checkpoint if available
402 if (trim(this%checkpoint_file) .ne. '') then
403 checkpoint_file = trim(this%checkpoint_file)
404 else
405 select case (trim(this%checkpoint_format))
406 case ('h5', 'hdf5', 'hf5', 'hdf')
407 checkpoint_file = trim(this%checkpoint_path) // &
408 'optimizer_rt_checkpoint.h5'
409 end select
410 end if
411
412 inquire(file = checkpoint_file, exist = file_exists)
413 if (file_exists) then
414 call this%load_checkpoint(checkpoint_file, this%current_iteration, &
415 design)
416 end if
417
418 ! compute potential internals for for a potential restart
419 if (this%current_iteration .ne. 0) then
420 call design%set_output_counter(this%current_iteration - 1)
421 if (present(simulation)) then
422 call simulation%set_output_counter(this%current_iteration - 1)
423 end if
424 end if
425
426 ! Prepare the problem state before starting the optimization
427 call this%initialize(problem, design, simulation)
428
429 call this%write(this%current_iteration, problem)
430 call design%write(this%current_iteration)
431
432 call neko_log%section('Optimization Loop')
433
434 do while (this%current_iteration .lt. this%max_iterations)
435 this%current_iteration = this%current_iteration + 1
436 if (pe_rank .eq. 0) then
437 write(*,*) 'Starting iteration ', this%current_iteration
438 end if
439
440 call profiler_start_region('Optimizer iteration')
441 iteration_time = mpi_wtime()
442
443 ! Update the parameters in continuation scheduler
444 call nekotop_continuation%update(this%current_iteration)
445
446 converged = this%step(this%current_iteration, problem, design, &
447 simulation)
448
449 iteration_time = mpi_wtime() - iteration_time
450 call profiler_end_region('Optimizer iteration')
451
452 ! Log the progress and outputs
453 call this%write(this%current_iteration, problem)
454 call design%write(this%current_iteration)
455
456 ! Save checkpoint if enabled
457 if (this%checkpoint_interval .gt. 0 .and. &
458 mod(this%current_iteration, this%checkpoint_interval) == 0) then
459 call this%save_checkpoint(this%current_iteration, design, .false.)
460 end if
461
462 ! --------------------------------------------------------------------- !
463 ! Check stopping criteria
464
465 if (converged) then
466 stop_flag = 0
467 exit
468 else if (this%out_of_time(iteration_time)) then
469 call this%save_checkpoint(this%current_iteration, design, .true., &
470 basename = 'optimizer_rt_checkpoint')
471 stop_flag = 2
472 exit
473 end if
474 end do
475
476 ! Check that the final design is valid
477 call this%validate(problem, design)
478 call this%print_status(stop_flag, this%current_iteration)
479
480 call neko_log%end_section()
481
482 end subroutine optimizer_run
483
484 ! ========================================================================== !
485 ! Helper routines
486
496 subroutine optimizer_print_status(this, stop_flag, iter)
497 class(optimizer_t), intent(in) :: this
498 integer, intent(in) :: stop_flag
499 integer, intent(in) :: iter
500 character(len=256) :: msg
501
502 select case (stop_flag)
503 case (0)
504 write(msg, '(A,I0,A)') 'Optimizer converged successfully after ', &
505 iter, ' iterations.'
506 call neko_log%message(msg)
507 case (1)
508 write(msg, '(A,I0,A)') 'Optimizer did not converge in ', &
509 this%max_iterations, ' iterations.'
510 call neko_log%warning(msg)
511 case (2)
512 write(msg, '(A,A,F8.2,A)') 'Optimizer stopped after reaching the ', &
513 'maximum runtime of ', this%max_runtime, ' seconds.'
514 call neko_error(trim(msg))
515
516 case default
517 write(msg, '(A)') 'Optimizer stopped for an unknown reason.'
518 call neko_error(msg)
519 end select
520 end subroutine optimizer_print_status
521
528 function optimizer_out_of_time(this, step_time) result(out_of_time)
529 class(optimizer_t), intent(inout) :: this
530 real(kind=rp), intent(in) :: step_time
531 logical :: out_of_time
532 real(kind=rp) :: elapsed_time, time, old_avg_weight
533
534 out_of_time = .false.
535
536 if (this%max_runtime .lt. 0.0_rp) then
537 return
538 end if
539
540 call mpi_allreduce(step_time, time, 1, mpi_real_precision, mpi_max, &
541 neko_comm)
542
543 elapsed_time = mpi_wtime() - this%start_time
544 this%step_count = this%step_count + 1.0_rp
545 old_avg_weight = (this%step_count - 1) / this%step_count
546
547 ! Estimate Cumulative Average iteration time
548 this%average_time = time / this%step_count + &
549 this%average_time * old_avg_weight
550
551 ! Determine if next iteration would exceed max runtime
552 out_of_time = (elapsed_time + this%average_time) .gt. this%max_runtime
553
554 end function optimizer_out_of_time
555
556 ! ========================================================================== !
557 ! Logging helpers
558
565 subroutine optimizer_init_log(this, problem, extra_headers, &
566 include_constraints, filename)
567 class(optimizer_t), intent(inout) :: this
568 class(problem_t), intent(in) :: problem
569 character(len=*), intent(in), optional :: extra_headers(:)
570 logical, intent(in), optional :: include_constraints
571 character(len=*), intent(in), optional :: filename
572
573 character(len=4096) :: header
574 integer :: total_size, base_size, i, n_cont
575 character(len=256) :: log_name
576
577 if (present(include_constraints)) then
578 this%log_include_constraints = include_constraints
579 end if
580 n_cont = nekotop_continuation%get_n_params()
581
582 base_size = problem%get_log_size(this%log_include_constraints)
583
584 this%log_extra_size = 0
585 if (present(extra_headers)) this%log_extra_size = size(extra_headers)
586
587 total_size = 1 + base_size + this%log_extra_size + n_cont
588 call this%log_data%init(total_size)
589
590 if (present(filename)) then
591 log_name = trim(filename)
592 else
593 log_name = 'optimization_data.csv'
594 end if
595
596 call this%log_file%init(trim(log_name))
597
598 header = 'iter, ' // &
599 trim(problem%get_log_header(this%log_include_constraints))
600 if (present(extra_headers)) then
601 do i = 1, size(extra_headers)
602 if (trim(extra_headers(i)) .eq. '') then
603 call neko_error('some headers are empty')
604 end if
605 header = trim(header) // ', ' // trim(extra_headers(i))
606 end do
607 end if
608
609 ! continuation parameters
610 do i = 1, n_cont
611 header = trim(header) // ', ' // &
612 trim(nekotop_continuation%get_param_name(i))
613 end do
614 call this%log_file%set_header(trim(header))
615
616 this%log_initialized = .true.
617 end subroutine optimizer_init_log
618
624 subroutine optimizer_write_log(this, iter, problem, extra_values)
625 class(optimizer_t), intent(inout) :: this
626 integer, intent(in) :: iter
627 class(problem_t), intent(in) :: problem
628 real(kind=rp), intent(in), optional :: extra_values(:)
629 integer :: base_size, offset, n_cont, i
630
631 if (.not. this%log_initialized) return
632
633 ! Number of continuation parameters
634 n_cont = nekotop_continuation%get_n_params()
635
636 base_size = problem%get_log_size(this%log_include_constraints)
637 this%log_data%x(1) = real(iter, kind=rp)
638
639 call problem%get_log_values( &
640 this%log_data%x(2:1 + base_size), &
641 this%log_include_constraints)
642
643 offset = 2 + base_size
644 if (present(extra_values)) then
645 if (this%log_extra_size .eq. 0) then
646 call neko_error('got extra values but no headers')
647 end if
648 this%log_data%x(offset:offset + size(extra_values) - 1) = extra_values
649 end if
650
651 ! Continuation parameter values
652 do i = 1, n_cont
653 this%log_data%x(offset + size(extra_values) - 1 + i) = &
654 nekotop_continuation%params(i)%target
655 end do
656
657 call this%log_file%write(this%log_data)
658
659 end subroutine optimizer_write_log
660
661 ! ========================================================================== !
662 ! IO Functions
663
672 subroutine optimizer_save_checkpoint(this, iter, design, overwrite, &
673 path, basename, format)
674 class(optimizer_t), intent(inout) :: this
675 integer, intent(in) :: iter
676 class(design_t), intent(inout) :: design
677 logical, intent(in) :: overwrite
678 character(len=*), intent(in), optional :: path
679 character(len=*), intent(in), optional :: basename
680 character(len=*), intent(in), optional :: format
681 character(len=:), allocatable :: checkpoint_format
682 character(len=256) :: file_path, file_base, file_ext, file_full
683 logical :: exist
684
685 ! Set default behaviour, read from object if not provided
686 if (.not. present(path)) file_path = trim(this%checkpoint_path)
687 if (.not. present(basename)) file_base = trim(this%checkpoint_base)
688 if (.not. present(format)) checkpoint_format = trim(this%checkpoint_format)
689
690 if (present(path)) file_path = trim(path)
691 if (present(basename)) file_base = trim(basename)
692 if (present(format)) checkpoint_format = trim(format)
693
694 ! Make sure path is valid and exists
695 if (len_trim(file_path) .eq. 0) then
696 file_path = './'
697 else if (file_path(len_trim(file_path):len_trim(file_path)) .ne. '/') then
698 file_path = trim(file_path) // '/'
699 end if
700
701 inquire(file=file_path, exist=exist)
702 if (.not. exist) then
703 call execute_command_line('mkdir -p "' // trim(file_path) // '"')
704 end if
705
706 select case (trim(checkpoint_format))
707 case ('h5', 'hdf5', 'hf5', 'hdf')
708 file_ext = 'h5'
709 case default
710 call neko_error('optimizer: Unsupported checkpoint format: "' // &
711 trim(checkpoint_format) // '"')
712 end select
713
714 ! Construct the full filename based on overwrite flag
715 if (overwrite) then
716 write(file_full, '(4A)') &
717 trim(file_path), trim(file_base), ".", trim(file_ext)
718 else
719 write(file_full, '(3A,I5.5,2A)') &
720 trim(file_path), trim(file_base), "_", iter, ".", trim(file_ext)
721 end if
722
723 select case (trim(file_ext))
724 case ('h5', 'hdf5', 'hf5')
725 call optimizer_save_checkpoint_hdf5(this, file_full, iter, overwrite)
726 case default
727 call neko_error('optimizer: Unsupported checkpoint format: "' // &
728 trim(file_ext) // '"')
729 end select
730
731 call this%save_checkpoint_components(file_full, overwrite)
732 call design%save_checkpoint(file_full, overwrite)
733
734 end subroutine optimizer_save_checkpoint
735
741 subroutine optimizer_load_checkpoint(this, filename, iter, design)
742 class(optimizer_t), intent(inout) :: this
743 character(len=*), intent(in) :: filename
744 integer, intent(out) :: iter
745 class(design_t), intent(inout) :: design
746 character(len=12) :: file_ext
747
748 ! Get the file extension
749 call filename_suffix(filename, file_ext)
750
751 select case (trim(file_ext))
752 case ('h5', 'hdf5', 'hf5')
753 call optimizer_load_checkpoint_hdf5(this, filename, iter)
754 case default
755 call neko_error('optimizer: Unsupported checkpoint format: "' // &
756 trim(file_ext) // '"')
757 end select
758
759 call this%load_checkpoint_components(filename)
760 call design%load_checkpoint(filename)
761
762 ! Set the current iteration to the loaded iteration
763 this%current_iteration = iter
764
765 if (pe_rank .eq. 0) then
766 write(*,*) 'Restarted simulation from checkpoint.'
767 write(*,*) ' Checkpoint file: "', trim(filename), '"'
768 write(*,*) ' Iteration : ', this%current_iteration
769 end if
770
771 end subroutine optimizer_load_checkpoint
772
773 ! ========================================================================== !
774 ! Dummy implementations for module procedures
775
776#if !HAVE_HDF5
777 module subroutine optimizer_save_checkpoint_hdf5(object, filename, iter, &
778 overwrite)
779 class(optimizer_t), intent(inout) :: object
780 character(len=*), intent(in) :: filename
781 integer, intent(in) :: iter
782 logical, intent(in), optional :: overwrite
783 call neko_error('optimizer: HDF5 support not enabled rebuild with ' // &
784 'HAVE_HDF5')
785 end subroutine optimizer_save_checkpoint_hdf5
786
787 module subroutine optimizer_load_checkpoint_hdf5(object, filename, iter)
788 class(optimizer_t), intent(inout) :: object
789 character(len=*), intent(in) :: filename
790 integer, intent(out) :: iter
791 call neko_error('optimizer: HDF5 support not enabled rebuild with ' // &
792 'HAVE_HDF5')
793 end subroutine optimizer_load_checkpoint_hdf5
794#endif
795
796end module optimizer
Factory function for the optimizer.
Interface for optimizer initialization.
Continuation scheduler for the optimization loop.
Implements the design_t.
Definition design.f90:36
Defines the abstract type optimizer.
Definition optimizer.f90:40
Module for handling the optimization problem.
Definition problem.f90:41
Implements the steady_problem_t type.
An abstract design type.
Definition design.f90:53
Abstract optimizer class.
Definition optimizer.f90:60
The abstract problem type.
Definition problem.f90:67